BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E05LP1|AL425706
(771 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1030 1475 0.0
>3x_Contig1030
Length = 5200
Score = 1475 bits (743), Expect = 0.0
Identities = 764/771 (99%), Gaps = 1/771 (0%)
Strand = Plus / Minus
Query: 1 gatcctgaatctttatcggctaagaaaaatataaacgtatttgtaacaggtgttactgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1285 gatcctgaatctttatcggctaagaaaaatataaacgtatttgtaacaggtgttactgga 1226
Query: 61 ttcttgggatcctacatcctagcagacctcctcaatcgcccgacctcttcctacaatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1225 ttcttgggatcctacatcctagcagacctcctcaatcgcccgacctcttcctacaatatt 1166
Query: 121 aaggtttttgcccatgttagagctaaaactgaggctgctggttttaacaggttaaaacaa 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 aaggtttttgcccatgtcagagctaaaactgaggctgctggttttaacaggttaaaacaa 1106
Query: 181 gctggtataacttatggtacttggtcagattctttcataaatagaattgaggttgtgtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1105 gctggtataacttatggtacttggtcagattctttcataaatagaattgaggttgtgtta 1046
Query: 241 ggtgacctttctaaggagaagttcggtttgccagaaggcacttggagcaacttggtcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 ggtgacctttctaaggagaagttcggtttgccagaaggcacttggagcaacttggtcaac 986
Query: 301 gaaattgacgttatcattcacaacggtgccttggttcattgggtatatycgtactcaaag 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 985 gaaattgacgttatcattcacaacggtgccttggttcattgggtatatccgtactcaaag 926
Query: 361 ctcagagaccctaatgttgttgcaactgttaatgttatgtctcttgccgcttcaggtaag 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 925 ctcagagaccctaatgttgttgcaactgtcaatgttatgtctcttgccgcttcaggtaag 866
Query: 421 gccaaatactttacgtttgtttcctctacttccacaattgataccgaacattacttttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 gccaaatactttacgtttgtttcctctacttccacaattgataccgaacattacttttca 806
Query: 481 ttatctgataagttagtgtcggagggaaagtctggtatcctagaagctgacgacttatca 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 805 ttatctgataagttagtgtcggagggaaagtctggtatcctagaagct-acgacttatca 747
Query: 541 ggatctgctgttgggttaactagtggatatggtcaatctaaatgggccgccgaatatatc 600
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ggatctgctgtcgggttaactagtggatatggtcaatctaaatgggccgccgaatatatc 687
Query: 601 ataagaagagcgggggagcgtggtcttcgcggctgcattgttagaccaggttatgttacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ataagaagagcgggggagcgtggtcttcgcggctgcattgttagaccaggttatgttacc 627
Query: 661 ggtgcctcatccaatgggtcgtccaatactgatgatttcttgttaagattcttaaagggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ggtgcctcatccaatgggtcgtccaatactgatgatttcttgttaagattcttaaagggg 567
Query: 721 gtggtacagttgggtcaaatccctaacatcagccacacagtwaatatggta 771
||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 566 gtggtacagttgggtcaaatccctaacatcagcaacacagttaatatggta 516
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4514
Number of Sequences: 1807
Number of extensions: 4514
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 771
length of database: 10,358,551
effective HSP length: 16
effective length of query: 755
effective length of database: 10,329,639
effective search space: 7798877445
effective search space used: 7798877445
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)